Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Ift88Q61371 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm38344-201ENSMUST00000195306 1353 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ift88Q61371 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Lrtm2-201ENSMUST00000068351 4001 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Ift88Q61371 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Actn2-201ENSMUST00000064204 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Gm5159-201ENSMUST00000212733 1652 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Gm16166-201ENSMUST00000118291 787 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm4726-201ENSMUST00000135604 736 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm6019-201ENSMUST00000148369 736 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm25732-201ENSMUST00000175168 60 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.98□□□□□ -0.49
Ift88Q61371 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Mir8115-201ENSMUST00000184992 119 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm5599-201ENSMUST00000209602 788 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 AC154532.1-201ENSMUST00000227860 965 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Mir433-201ENSMUST00000093564 124 ntBASIC11.98□□□□□ -0.49
Ift88Q61371 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ift88Q61371 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ift88Q61371 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ift88Q61371 Gm45124-201ENSMUST00000206723 2755 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC11.97□□□□□ -0.49
Ift88Q61371 Gm12997-201ENSMUST00000120207 640 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ift88Q61371 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ift88Q61371 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.97□□□□□ -0.49
Ift88Q61371 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ift88Q61371 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms