Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm4812-201ENSMUST00000182847 993 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm44155-201ENSMUST00000203923 412 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm8162-201ENSMUST00000213951 665 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm28047Q3US59 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.36□□□□□ -0.43
Gm28047Q3US59 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Gm28047Q3US59 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 AC122367.1-201ENSMUST00000221978 1709 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Snord23-201ENSMUST00000116828 109 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm14892-201ENSMUST00000117636 267 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm43380-201ENSMUST00000200421 220 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm3786-201ENSMUST00000202659 378 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Snora73b-201ENSMUST00000083419 205 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.35□□□□□ -0.43
Gm28047Q3US59 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm28047Q3US59 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm28047Q3US59 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm12389-201ENSMUST00000117696 418 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm16518-201ENSMUST00000117960 508 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm28047Q3US59 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm6407-201ENSMUST00000176468 549 ntBASIC12.34□□□□□ -0.43
Gm28047Q3US59 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm28047Q3US59 Gm33080-201ENSMUST00000205429 172 ntBASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms