Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm44100-201ENSMUST00000204329 436 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Olfr584-201ENSMUST00000098210 964 ntBASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Nudcd1-201ENSMUST00000038719 2600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Synpo2l-203ENSMUST00000119483 3696 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trim43aQ3TL54 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim43aQ3TL54 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm16219-201ENSMUST00000120096 274 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm9089-201ENSMUST00000122027 526 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm19353-201ENSMUST00000184561 445 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm10774-201ENSMUST00000188689 204 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm3786-201ENSMUST00000202659 378 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.52□□□□□ -0.57
Trim43aQ3TL54 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim43aQ3TL54 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Nlrx1-201ENSMUST00000034621 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gm14193-201ENSMUST00000105067 153 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Platr10-202ENSMUST00000191479 818 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gm2517-201ENSMUST00000215651 348 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim43aQ3TL54 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms