Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm29773-201ENSMUST00000212751 1895 ntTSL 2 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm12712-201ENSMUST00000120676 801 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm11701-201ENSMUST00000121277 1142 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Mir6387-201ENSMUST00000184042 108 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm28916-201ENSMUST00000186988 699 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm43244-201ENSMUST00000196994 1285 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 AC153379.1-201ENSMUST00000218174 485 ntTSL 3 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gm6478-201ENSMUST00000099450 742 ntBASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Znf541Q0GGX2 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm8873-201ENSMUST00000217847 1439 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Kif2a-206ENSMUST00000159772 2570 ntTSL 5 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Chrm5-201ENSMUST00000099589 1599 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 AC144938.1-201ENSMUST00000223994 2167 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 AC122367.1-201ENSMUST00000221978 1709 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm14274-201ENSMUST00000117182 615 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm15285-201ENSMUST00000119271 473 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm37207-201ENSMUST00000194284 296 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm45094-201ENSMUST00000207013 617 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm4032-203ENSMUST00000211600 531 ntTSL 3 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm8325-201ENSMUST00000099086 453 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 AC154575.1-201ENSMUST00000227166 1474 ntBASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Prl8a1-202ENSMUST00000095926 1682 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Babam2-201ENSMUST00000063813 1410 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Znf541Q0GGX2 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Tstd2-202ENSMUST00000107772 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Gm16574-201ENSMUST00000159301 745 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Mir6360-201ENSMUST00000184278 126 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Gm6794-201ENSMUST00000203829 457 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Gm18204-201ENSMUST00000209835 793 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 AC101205.2-201ENSMUST00000226206 715 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Gsg1-204ENSMUST00000111911 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Znf541Q0GGX2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Znf541Q0GGX2 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
Znf541Q0GGX2 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Znf541Q0GGX2 Gm43737-201ENSMUST00000199915 2740 ntBASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Gm28578-203ENSMUST00000189196 1470 ntTSL 5 BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Nos2-203ENSMUST00000214397 3429 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Znf541Q0GGX2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms