Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Syna-201ENSMUST00000149604 2026 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cacna1sQ02789 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm15032-201ENSMUST00000118547 411 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm8488-201ENSMUST00000176112 1280 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm21818-201ENSMUST00000178828 513 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm12424-201ENSMUST00000179673 447 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Pea15b-202ENSMUST00000183185 555 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm21577-201ENSMUST00000190823 697 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Gm20802-201ENSMUST00000190832 698 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 AC156561.1-201ENSMUST00000224774 233 ntBASIC13.46□□□□□ -0.25
Cacna1sQ02789 Cst13-201ENSMUST00000046589 783 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Klk11-201ENSMUST00000080211 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cacna1sQ02789 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1sQ02789 Gm13197-201ENSMUST00000117204 225 ntBASIC13.46□□□□□ -0.26
Cacna1sQ02789 Gm22481-201ENSMUST00000122562 192 ntBASIC13.46□□□□□ -0.26
Cacna1sQ02789 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC13.46□□□□□ -0.26
Cacna1sQ02789 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1sQ02789 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Cacna1sQ02789 Gm3116-201ENSMUST00000189440 1116 ntBASIC13.46□□□□□ -0.26
Cacna1sQ02789 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cacna1sQ02789 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Ucma-205ENSMUST00000195688 554 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm17806-201ENSMUST00000195844 383 ntBASIC13.45□□□□□ -0.26
Cacna1sQ02789 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm18030-201ENSMUST00000222163 731 ntBASIC13.45□□□□□ -0.26
Cacna1sQ02789 Arl15-202ENSMUST00000224068 1002 ntBASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm4925-201ENSMUST00000092231 397 ntBASIC13.45□□□□□ -0.26
Cacna1sQ02789 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Gm42851-201ENSMUST00000201325 1411 ntBASIC13.45□□□□□ -0.26
Cacna1sQ02789 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cacna1sQ02789 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm14676-201ENSMUST00000117722 858 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm15369-201ENSMUST00000119681 394 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm22987-201ENSMUST00000122757 246 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm6439-201ENSMUST00000199849 862 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Rpl6-201ENSMUST00000031617 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm43362-201ENSMUST00000198192 2470 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.44□□□□□ -0.26
Cacna1sQ02789 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cacna1sQ02789 Vgll3-202ENSMUST00000227997 1383 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms