Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm14997-201ENSMUST00000119232 636 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm8464-202ENSMUST00000146697 1142 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm4750-201ENSMUST00000151942 1142 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm42859-201ENSMUST00000199572 193 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm18256-201ENSMUST00000209087 907 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcc1P97496 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.66□□□□□ -0.22
Smarcc1P97496 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.66□□□□□ -0.22
Smarcc1P97496 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Smarcc1P97496 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smarcc1P97496 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm12345-201ENSMUST00000119288 898 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm14699-201ENSMUST00000122340 228 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm4868-201ENSMUST00000164138 789 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm40414-201ENSMUST00000197608 481 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Gm9701-201ENSMUST00000077976 427 ntBASIC13.65□□□□□ -0.22
Smarcc1P97496 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smarcc1P97496 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smarcc1P97496 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC13.65□□□□□ -0.23
Smarcc1P97496 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 AC167565.1-201ENSMUST00000226980 1833 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.64□□□□□ -0.23
Smarcc1P97496 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Focad-202ENSMUST00000107147 1177 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm14639-201ENSMUST00000120850 866 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm15031-201ENSMUST00000121341 210 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm14829-201ENSMUST00000121499 1138 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm13505-201ENSMUST00000121666 817 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm22388-201ENSMUST00000158194 248 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm8707-201ENSMUST00000183325 980 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm43997-201ENSMUST00000203986 1005 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm44908-201ENSMUST00000208610 266 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Smarcc1P97496 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Smarcc1P97496 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.64□□□□□ -0.23
Smarcc1P97496 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.64□□□□□ -0.23
Smarcc1P97496 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms