Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Gm37301-201ENSMUST00000195412 568 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.8□□□□□ -0.52
CiitaP79621 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.8□□□□□ -0.52
CiitaP79621 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
CiitaP79621 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
CiitaP79621 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CiitaP79621 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.8□□□□□ -0.52
CiitaP79621 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CiitaP79621 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CiitaP79621 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.8□□□□□ -0.52
CiitaP79621 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CiitaP79621 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CiitaP79621 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
CiitaP79621 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.79□□□□□ -0.52
CiitaP79621 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CiitaP79621 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.79□□□□□ -0.52
CiitaP79621 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CiitaP79621 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
CiitaP79621 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
CiitaP79621 Gm9574-201ENSMUST00000173127 845 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Gm25951-201ENSMUST00000175330 64 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm37723-201ENSMUST00000194480 565 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Gm42751-201ENSMUST00000198065 559 ntBASIC11.79□□□□□ -0.52
CiitaP79621 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.79□□□□□ -0.52
CiitaP79621 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.79□□□□□ -0.52
CiitaP79621 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
CiitaP79621 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
CiitaP79621 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
CiitaP79621 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Rgr-203ENSMUST00000225070 4704 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
CiitaP79621 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm12712-201ENSMUST00000120676 801 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm15031-201ENSMUST00000121341 210 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm14113-201ENSMUST00000121399 976 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.78□□□□□ -0.52
CiitaP79621 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CiitaP79621 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.78□□□□□ -0.52
CiitaP79621 Gm16288-201ENSMUST00000137940 367 ntBASIC11.78□□□□□ -0.52
CiitaP79621 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm25569-201ENSMUST00000157175 131 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.78□□□□□ -0.52
CiitaP79621 Gm25677-201ENSMUST00000174983 72 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm27441-201ENSMUST00000185000 105 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm37852-201ENSMUST00000193027 350 ntBASIC11.78□□□□□ -0.52
CiitaP79621 Gm43564-201ENSMUST00000196185 211 ntBASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms