Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Irf3P70671 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Irf3P70671 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Irf3P70671 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Irf3P70671 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gm45719-201ENSMUST00000207954 1662 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Irf3P70671 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gm11354-201ENSMUST00000121974 422 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.81□□□□□ -0.52
Irf3P70671 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC11.81□□□□□ -0.52
Irf3P70671 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Gm42803-201ENSMUST00000201051 451 ntBASIC11.81□□□□□ -0.52
Irf3P70671 AC124581.2-201ENSMUST00000225459 282 ntBASIC11.81□□□□□ -0.52
Irf3P70671 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.81□□□□□ -0.52
Irf3P70671 CT030195.2-201ENSMUST00000226074 1286 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Mir194-2-201ENSMUST00000083648 86 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.81□□□□□ -0.52
Irf3P70671 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Irf3P70671 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Irf3P70671 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.81□□□□□ -0.52
Irf3P70671 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Irf3P70671 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Irf3P70671 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Irf3P70671 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Irf3P70671 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Gm12950-201ENSMUST00000121683 417 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.8□□□□□ -0.52
Irf3P70671 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Irf3P70671 Gm29763-201ENSMUST00000205306 616 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Gm45094-201ENSMUST00000207013 617 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Gm2448-201ENSMUST00000207080 559 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 AC154436.1-201ENSMUST00000227272 782 ntBASIC11.8□□□□□ -0.52
Irf3P70671 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.8□□□□□ -0.52
Irf3P70671 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Irf3P70671 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Irf3P70671 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Irf3P70671 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms