Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Ybx1P62960 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ybx1P62960 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Ybx1P62960 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ybx1P62960 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ybx1P62960 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm15707-201ENSMUST00000118804 996 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm25288-201ENSMUST00000122800 265 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm20493-201ENSMUST00000173706 213 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm5808-201ENSMUST00000178090 357 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm5335-201ENSMUST00000182995 1000 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm5254-201ENSMUST00000188353 977 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Platr10-202ENSMUST00000191479 818 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ybx1P62960 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Ybx1P62960 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Ybx1P62960 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 AC151836.1-201ENSMUST00000228730 1637 ntBASIC11.17□□□□□ -0.62
Ybx1P62960 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ybx1P62960 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.16□□□□□ -0.62
Ybx1P62960 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Gm17836-201ENSMUST00000191976 1302 ntBASIC11.16□□□□□ -0.62
Ybx1P62960 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Ybx1P62960 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ybx1P62960 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Ybx1P62960 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Ybx1P62960 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.16□□□□□ -0.62
Ybx1P62960 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Gm5526-201ENSMUST00000153604 423 ntBASIC11.16□□□□□ -0.62
Ybx1P62960 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.16□□□□□ -0.62
Ybx1P62960 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ybx1P62960 Gm6291-201ENSMUST00000179994 309 ntBASIC11.16□□□□□ -0.62
Ybx1P62960 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ybx1P62960 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms