Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm42971-201ENSMUST00000199228 2079 ntBASIC12.08□□□□□ -0.48
Tpm1P58771 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm4294-201ENSMUST00000105169 614 ntBASIC12.08□□□□□ -0.48
Tpm1P58771 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.08□□□□□ -0.48
Tpm1P58771 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Tpm1P58771 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.08□□□□□ -0.48
Tpm1P58771 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.08□□□□□ -0.48
Tpm1P58771 Gm8385-201ENSMUST00000058999 643 ntBASIC12.08□□□□□ -0.48
Tpm1P58771 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Tpm1P58771 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC12.08□□□□□ -0.48
Tpm1P58771 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.08□□□□□ -0.48
Tpm1P58771 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.08□□□□□ -0.48
Tpm1P58771 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tpm1P58771 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Dhdh-201ENSMUST00000011526 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Vma21-201ENSMUST00000114575 4290 ntTSL 2 BASIC12.07□□□□□ -0.48
Tpm1P58771 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm15264-201ENSMUST00000118050 502 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm8731-201ENSMUST00000118088 412 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm14723-201ENSMUST00000118686 215 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm8199-201ENSMUST00000121323 823 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.07□□□□□ -0.48
Tpm1P58771 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm19246-201ENSMUST00000173599 255 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm4482-201ENSMUST00000200876 742 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm6082-201ENSMUST00000215204 454 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.07□□□□□ -0.48
Tpm1P58771 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tpm1P58771 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tpm1P58771 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.07□□□□□ -0.48
Tpm1P58771 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tpm1P58771 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Tpm1P58771 Bcat1-203ENSMUST00000111742 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tpm1P58771 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms