Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm25492-201ENSMUST00000157383 129 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Gm24074-201ENSMUST00000158178 260 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Gm9550-201ENSMUST00000161130 862 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.84□□□□□ -0.83
Rfx3P48381 Gm29067-201ENSMUST00000190821 470 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Gm17831-201ENSMUST00000205579 900 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.84□□□□□ -0.83
Rfx3P48381 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.84□□□□□ -0.83
Rfx3P48381 AC115122.1-201ENSMUST00000224850 1040 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Rfx3P48381 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Gm5451-201ENSMUST00000080545 579 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Rims2-204ENSMUST00000226410 3685 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 Myo18a-203ENSMUST00000092887 7304 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Rfx3P48381 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC9.84□□□□□ -0.83
Rfx3P48381 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.84□□□□□ -0.83
Rfx3P48381 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Rfx3P48381 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
Rfx3P48381 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm23061-201ENSMUST00000102348 116 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm23272-201ENSMUST00000104053 129 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm24992-201ENSMUST00000157412 130 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.83□□□□□ -0.84
Rfx3P48381 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm10020-201ENSMUST00000081993 612 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm23105-201ENSMUST00000083719 134 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.83□□□□□ -0.84
Rfx3P48381 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Gm9244-201ENSMUST00000056767 2129 ntBASIC9.83□□□□□ -0.84
Rfx3P48381 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Rfx3P48381 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Rfx3P48381 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.83□□□□□ -0.84
Rfx3P48381 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Rfx3P48381 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Rfx3P48381 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.82□□□□□ -0.84
Rfx3P48381 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms