Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm16547-201ENSMUST00000159474 293 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm18733-202ENSMUST00000174447 401 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Nkx2-6P43688 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm22594-201ENSMUST00000104251 130 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Mir1893-201ENSMUST00000122565 83 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm23647-201ENSMUST00000175042 109 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm27956-201ENSMUST00000175604 260 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Rn5s-201ENSMUST00000177555 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s108-201ENSMUST00000177575 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s121-201ENSMUST00000177589 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s146-201ENSMUST00000177889 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm22109-201ENSMUST00000177995 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm22291-201ENSMUST00000178027 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s141-201ENSMUST00000178066 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm23284-201ENSMUST00000178069 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s100-201ENSMUST00000178106 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s111-201ENSMUST00000178203 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s105-201ENSMUST00000178499 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s149-201ENSMUST00000178520 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s103-201ENSMUST00000178755 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s123-201ENSMUST00000178804 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s142-201ENSMUST00000178820 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s144-201ENSMUST00000178859 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s139-201ENSMUST00000178975 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s134-201ENSMUST00000178983 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s136-201ENSMUST00000179080 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm25018-201ENSMUST00000179081 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s104-201ENSMUST00000179107 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s113-201ENSMUST00000179143 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s133-201ENSMUST00000179275 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s117-201ENSMUST00000179431 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm25212-201ENSMUST00000179432 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s138-201ENSMUST00000179476 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s122-201ENSMUST00000179500 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s143-201ENSMUST00000179542 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s107-201ENSMUST00000179704 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 Gm26391-201ENSMUST00000179843 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s110-201ENSMUST00000179995 119 ntBASIC10.32□□□□□ -0.76
Nkx2-6P43688 n-R5s128-201ENSMUST00000180096 119 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms