Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm8019-201ENSMUST00000119317 587 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm15136-201ENSMUST00000120552 533 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm24294-201ENSMUST00000158295 277 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm23694-201ENSMUST00000179335 110 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm26875-201ENSMUST00000181006 950 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm7765-201ENSMUST00000182585 974 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm9369-201ENSMUST00000196009 733 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm18290-201ENSMUST00000202900 844 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm18010-201ENSMUST00000203553 202 ntBASIC10.82□□□□□ -0.68
Sox18P43680 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox18P43680 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gm7344-201ENSMUST00000212122 1222 ntBASIC10.82□□□□□ -0.68
Sox18P43680 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.82□□□□□ -0.68
Sox18P43680 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 CT025523.1-201ENSMUST00000228318 694 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox18P43680 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox18P43680 Gm3563-201ENSMUST00000172963 1628 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Sox18P43680 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.82□□□□□ -0.68
Sox18P43680 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox18P43680 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm12757-201ENSMUST00000119465 800 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm15329-201ENSMUST00000121408 155 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm15982-201ENSMUST00000121681 554 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm4943-201ENSMUST00000132879 424 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Tac1-203ENSMUST00000184986 691 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm38007-201ENSMUST00000192187 313 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox18P43680 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm43489-201ENSMUST00000196810 993 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm42751-201ENSMUST00000198065 559 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm6518-201ENSMUST00000208450 342 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Lrrc72-201ENSMUST00000020853 660 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm18242-201ENSMUST00000218455 542 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC10.81□□□□□ -0.68
Sox18P43680 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox18P43680 AC125464.1-201ENSMUST00000228013 512 ntBASIC10.81□□□□□ -0.68
Sox18P43680 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox18P43680 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms