Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
VhlP40338 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
VhlP40338 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
VhlP40338 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VhlP40338 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
VhlP40338 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VhlP40338 Birc6-202ENSMUST00000180037 15768 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Gpi1-201ENSMUST00000038027 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
VhlP40338 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Mllt10-201ENSMUST00000028076 4917 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC8.92□□□□□ -0.98
VhlP40338 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC8.92□□□□□ -0.98
VhlP40338 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VhlP40338 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC8.92□□□□□ -0.98
VhlP40338 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC8.92□□□□□ -0.98
VhlP40338 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VhlP40338 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC8.92□□□□□ -0.98
VhlP40338 Gm8385-201ENSMUST00000058999 643 ntBASIC8.92□□□□□ -0.98
VhlP40338 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
VhlP40338 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC8.92□□□□□ -0.98
VhlP40338 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
VhlP40338 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC8.92□□□□□ -0.98
VhlP40338 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
VhlP40338 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC8.91□□□□□ -0.98
VhlP40338 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gm37660-201ENSMUST00000192754 1732 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC8.91□□□□□ -0.98
VhlP40338 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
VhlP40338 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gm6903-201ENSMUST00000160509 1366 ntBASIC8.91□□□□□ -0.98
VhlP40338 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gfra2-203ENSMUST00000227697 1323 ntBASIC8.91□□□□□ -0.98
VhlP40338 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
VhlP40338 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
VhlP40338 Cdh18-207ENSMUST00000226693 2165 ntBASIC8.91□□□□□ -0.98
VhlP40338 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
VhlP40338 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC8.91□□□□□ -0.98
VhlP40338 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC8.91□□□□□ -0.98
VhlP40338 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC8.91□□□□□ -0.98
VhlP40338 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC8.91□□□□□ -0.98
VhlP40338 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC8.91□□□□□ -0.98
VhlP40338 Gm24992-201ENSMUST00000157412 130 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gm6397-201ENSMUST00000161973 1069 ntBASIC8.91□□□□□ -0.98
VhlP40338 Rn7s1-201ENSMUST00000174924 300 ntBASIC8.91□□□□□ -0.98
VhlP40338 Rn7s2-201ENSMUST00000175032 300 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm26461-201ENSMUST00000175064 290 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
VhlP40338 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC8.91□□□□□ -0.98
VhlP40338 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm43852-201ENSMUST00000202098 917 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm19091-201ENSMUST00000208120 978 ntBASIC8.91□□□□□ -0.98
VhlP40338 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms