Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Gm13351-201ENSMUST00000118087 414 ntBASIC8.98□□□□□ -0.97
Timp3P39876 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Mir1905-201ENSMUST00000122779 82 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
Timp3P39876 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC8.98□□□□□ -0.97
Timp3P39876 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC8.98□□□□□ -0.97
Timp3P39876 Olfml3-204ENSMUST00000169286 874 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Ighv2-1-201ENSMUST00000170946 353 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Gm29164-201ENSMUST00000185454 1024 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Gm18776-201ENSMUST00000188833 654 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Gm18514-201ENSMUST00000218980 436 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC8.98□□□□□ -0.97
Timp3P39876 CT025602.2-201ENSMUST00000226553 772 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Timp3P39876 Gm25201-201ENSMUST00000083093 170 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Timp3P39876 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Gm45161-201ENSMUST00000207316 2263 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 AC154537.1-201ENSMUST00000226101 1304 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Nudt13-207ENSMUST00000224311 1574 ntBASIC8.98□□□□□ -0.97
Timp3P39876 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Timp3P39876 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC8.98□□□□□ -0.97
Timp3P39876 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Timp3P39876 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Timp3P39876 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Timp3P39876 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Timp3P39876 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.97□□□□□ -0.97
Timp3P39876 Gm43999-201ENSMUST00000204286 2889 ntBASIC8.97□□□□□ -0.97
Timp3P39876 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.97□□□□□ -0.97
Timp3P39876 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC8.97□□□□□ -0.97
Timp3P39876 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Timp3P39876 Gm25148-201ENSMUST00000104611 123 ntBASIC8.97□□□□□ -0.97
Timp3P39876 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Timp3P39876 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Timp3P39876 Gm12218-201ENSMUST00000117666 399 ntBASIC8.97□□□□□ -0.97
Timp3P39876 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC8.97□□□□□ -0.97
Timp3P39876 Gm12791-201ENSMUST00000120788 655 ntBASIC8.97□□□□□ -0.97
Timp3P39876 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Timp3P39876 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms