Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Dntt-202ENSMUST00000112200 2068 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Parp10-201ENSMUST00000075689 3284 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Smim1P0C8K7 Gm44510-201ENSMUST00000206288 4532 ntBASIC7.39□□□□□ -1.23
Smim1P0C8K7 Crispld2-203ENSMUST00000132583 4182 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Tnxa-201ENSMUST00000173277 2975 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Iqcg-202ENSMUST00000115100 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Cd177-201ENSMUST00000063956 2714 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 5430430B14Rik-201ENSMUST00000209427 1630 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Gm43366-201ENSMUST00000199829 2655 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Cenpo-202ENSMUST00000111169 1550 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Gm37039-201ENSMUST00000193733 2485 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Lrrk2-201ENSMUST00000060642 8275 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Trak1-211ENSMUST00000211187 4043 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Snrpd3-201ENSMUST00000020397 3036 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Gm2756-201ENSMUST00000195851 400 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 AC159006.1-201ENSMUST00000226396 258 ntBASIC7.38□□□□□ -1.23
Smim1P0C8K7 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Zfp287-203ENSMUST00000128370 2062 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Tgm4-201ENSMUST00000026893 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Rph3a-204ENSMUST00000202406 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Akt2-204ENSMUST00000108343 3122 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 AC116589.5-201ENSMUST00000222230 1660 ntTSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 H2-T3-204ENSMUST00000102675 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Smim1P0C8K7 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Mpo-201ENSMUST00000020779 2750 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Nkiras1-202ENSMUST00000132374 4598 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm45705-201ENSMUST00000211831 2134 ntBASIC7.37□□□□□ -1.23
Smim1P0C8K7 Nedd4l-201ENSMUST00000080418 3326 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Usp10-202ENSMUST00000108988 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm19221-201ENSMUST00000221827 1477 ntBASIC7.37□□□□□ -1.23
Smim1P0C8K7 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm37843-201ENSMUST00000195213 2639 ntBASIC7.37□□□□□ -1.23
Smim1P0C8K7 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Nt5c1b-217ENSMUST00000219826 2023 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Atp9a-202ENSMUST00000109175 3729 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm12097-201ENSMUST00000121523 1414 ntBASIC7.37□□□□□ -1.23
Smim1P0C8K7 Prpf31-206ENSMUST00000179769 3125 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Kif28-203ENSMUST00000221136 3538 ntAPPRIS P5 TSL 5 BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Itgb6-201ENSMUST00000028348 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Brca2-210ENSMUST00000202313 10517 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm45746-201ENSMUST00000212623 2447 ntBASIC7.37□□□□□ -1.23
Smim1P0C8K7 Rpa1-201ENSMUST00000000767 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Gm26773-201ENSMUST00000180772 2868 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Atp8b3-201ENSMUST00000020383 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Smim1P0C8K7 Rfx2-201ENSMUST00000002444 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms