Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 AC158631.2-201ENSMUST00000219999 478 ntBASIC8.84□□□□□ -0.99
Hoxd3P09027 Gm19046-201ENSMUST00000221263 1298 ntBASIC8.84□□□□□ -0.99
Hoxd3P09027 CT025618.1-201ENSMUST00000227409 1279 ntBASIC8.84□□□□□ -0.99
Hoxd3P09027 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.84□□□□□ -0.99
Hoxd3P09027 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Hoxd3P09027 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hoxd3P09027 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Hoxd3P09027 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hoxd3P09027 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hoxd3P09027 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.84□□□□□ -1
Hoxd3P09027 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Hoxd3P09027 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 AC129336.1-201ENSMUST00000220224 2277 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm25766-201ENSMUST00000104101 131 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hoxd3P09027 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC8.83□□□□□ -1
Hoxd3P09027 Klra14-ps-201ENSMUST00000119532 802 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm12383-201ENSMUST00000120628 760 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm14503-201ENSMUST00000130337 1164 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC8.83□□□□□ -1
Hoxd3P09027 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm24398-201ENSMUST00000157870 109 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm2541-201ENSMUST00000161209 711 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hoxd3P09027 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hoxd3P09027 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Gm37826-201ENSMUST00000195329 322 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm42518-201ENSMUST00000196277 938 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm43946-201ENSMUST00000204058 886 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm45379-201ENSMUST00000211772 549 ntBASIC8.83□□□□□ -1
Hoxd3P09027 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm6722-201ENSMUST00000221586 390 ntBASIC8.83□□□□□ -1
Hoxd3P09027 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.83□□□□□ -1
Hoxd3P09027 Prrxl1-205ENSMUST00000228878 723 ntBASIC8.83□□□□□ -1
Hoxd3P09027 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hoxd3P09027 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hoxd3P09027 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms