Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC9.38□□□□□ -0.91
H3f3cP02301 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm42816-201ENSMUST00000198433 325 ntBASIC9.38□□□□□ -0.91
H3f3cP02301 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.38□□□□□ -0.91
H3f3cP02301 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.38□□□□□ -0.91
H3f3cP02301 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.38□□□□□ -0.91
H3f3cP02301 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 CT025553.1-201ENSMUST00000226292 299 ntBASIC9.38□□□□□ -0.91
H3f3cP02301 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3cP02301 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
H3f3cP02301 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
H3f3cP02301 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
H3f3cP02301 Gm6024-201ENSMUST00000117850 1558 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3cP02301 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC9.37□□□□□ -0.91
H3f3cP02301 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm12194-201ENSMUST00000117756 1012 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm15197-201ENSMUST00000120526 478 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm12899-201ENSMUST00000120565 551 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.37□□□□□ -0.91
H3f3cP02301 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm28032-201ENSMUST00000184104 96 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm8531-201ENSMUST00000188319 893 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Platr10-202ENSMUST00000191479 818 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm43692-201ENSMUST00000198236 1062 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm43380-201ENSMUST00000200421 220 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm39288-201ENSMUST00000210554 446 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Id2-203ENSMUST00000222667 958 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 AC136376.2-201ENSMUST00000228819 490 ntBASIC9.37□□□□□ -0.91
H3f3cP02301 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
H3f3cP02301 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
H3f3cP02301 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms