Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm44540-201ENSMUST00000205640 354 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 AC132384.2-201ENSMUST00000218018 526 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 AC163638.2-201ENSMUST00000224920 827 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm12435-201ENSMUST00000118949 1016 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm6238-201ENSMUST00000120999 465 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm15793-201ENSMUST00000121857 495 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm23432-201ENSMUST00000157181 131 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Mir3091-201ENSMUST00000175086 76 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm27833-201ENSMUST00000184285 124 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm28671-201ENSMUST00000187036 692 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm3527-201ENSMUST00000198905 460 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm42867-201ENSMUST00000202995 469 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 AC134793.1-202ENSMUST00000227444 803 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm5292-201ENSMUST00000073317 580 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 AC124577.2-201ENSMUST00000217413 2420 ntBASIC13.18□□□□□ -0.3
NpcdF8VQB8 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NpcdF8VQB8 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Tnfrsf14-205ENSMUST00000219534 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NpcdF8VQB8 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm16477-201ENSMUST00000085365 801 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm17415-201ENSMUST00000096427 789 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 Gm14005-209ENSMUST00000224993 1832 ntBASIC13.17□□□□□ -0.3
NpcdF8VQB8 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NpcdF8VQB8 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms