Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Grb10-202ENSMUST00000109653 2048 ntTSL 5 BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Ccr9Q9WUT7 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm4909-201ENSMUST00000118749 794 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm12997-201ENSMUST00000120207 640 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm25732-201ENSMUST00000175168 60 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm26574-201ENSMUST00000181876 2141 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm42859-201ENSMUST00000199572 193 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm9257-201ENSMUST00000221254 232 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Spata33-207ENSMUST00000212760 4074 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm42851-201ENSMUST00000201325 1411 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Ccr9Q9WUT7 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Slc27a5-201ENSMUST00000032539 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm9271-201ENSMUST00000185988 2580 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm12165-201ENSMUST00000117047 342 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm18164-201ENSMUST00000213769 927 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm18166-201ENSMUST00000215557 927 ntBASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.53□□□□□ -0.88
Ccr9Q9WUT7 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms