Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm37806-201ENSMUST00000194524 6387 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm14592-201ENSMUST00000117201 560 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm7857-201ENSMUST00000117957 358 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm12217-201ENSMUST00000118858 696 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm44315-201ENSMUST00000203041 219 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm23105-201ENSMUST00000083719 134 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Col4a4-201ENSMUST00000087050 10108 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.26□□□□□ -0.77
Nkd1Q99MH6 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Nkd1Q99MH6 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Tnc-204ENSMUST00000107377 7100 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm15352-201ENSMUST00000118696 270 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm22144-201ENSMUST00000157402 102 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm25226-201ENSMUST00000158198 123 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm23699-201ENSMUST00000158835 135 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm4654-201ENSMUST00000183305 982 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm28746-201ENSMUST00000187453 380 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm37301-201ENSMUST00000195412 568 ntBASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Nkd1Q99MH6 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms