Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 BC043934-202ENSMUST00000185694 2356 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gm3828-201ENSMUST00000121817 257 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gm7255-201ENSMUST00000187371 908 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gm39288-201ENSMUST00000210554 446 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gm45594-201ENSMUST00000211717 241 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 AC154461.3-201ENSMUST00000224831 573 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.28□□□□□ -0.76
Clrn1Q8K445 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Clrn1Q8K445 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.27□□□□□ -0.76
Clrn1Q8K445 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.27□□□□□ -0.76
Clrn1Q8K445 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.27□□□□□ -0.76
Clrn1Q8K445 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.27□□□□□ -0.76
Clrn1Q8K445 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Clrn1Q8K445 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm25116-201ENSMUST00000157191 122 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm26134-201ENSMUST00000178484 110 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm44158-201ENSMUST00000203881 505 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.27□□□□□ -0.77
Clrn1Q8K445 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Clrn1Q8K445 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms