Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm13758-201ENSMUST00000118699 743 ntBASIC15.23■□□□□ 0.03
Usp54Q8BL06 Lypla1-203ENSMUST00000119612 529 ntTSL 3 BASIC15.23■□□□□ 0.03
Usp54Q8BL06 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Gm3687-201ENSMUST00000161710 460 ntBASIC15.23■□□□□ 0.03
Usp54Q8BL06 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Gm7319-201ENSMUST00000210047 778 ntBASIC15.23■□□□□ 0.03
Usp54Q8BL06 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Gm18749-201ENSMUST00000222410 692 ntBASIC15.23■□□□□ 0.03
Usp54Q8BL06 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usp54Q8BL06 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm14538-201ENSMUST00000122019 1327 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm11800-201ENSMUST00000120050 579 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm7251-201ENSMUST00000182661 1009 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm37301-201ENSMUST00000195412 568 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm17815-201ENSMUST00000198305 895 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm7812-201ENSMUST00000203479 874 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 AC166061.1-201ENSMUST00000225163 1138 ntBASIC15.22■□□□□ 0.03
Usp54Q8BL06 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usp54Q8BL06 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Scgb1b21-201ENSMUST00000170232 268 ntBASIC15.21■□□□□ 0.03
Usp54Q8BL06 Gm26379-201ENSMUST00000178125 138 ntBASIC15.21■□□□□ 0.03
Usp54Q8BL06 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Eif3m-201ENSMUST00000028592 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Gm17541-201ENSMUST00000080062 525 ntBASIC15.21■□□□□ 0.03
Usp54Q8BL06 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Deup1-203ENSMUST00000115593 3019 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usp54Q8BL06 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Gm14858-201ENSMUST00000138614 1758 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Usp54Q8BL06 Gm21142-201ENSMUST00000179999 2604 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm13303-201ENSMUST00000117125 1284 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm26021-201ENSMUST00000158664 131 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm37390-201ENSMUST00000192452 872 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm8083-201ENSMUST00000203976 475 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 CT025689.5-201ENSMUST00000224316 986 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 CT025618.1-201ENSMUST00000227409 1279 ntBASIC15.2■□□□□ 0.02
Usp54Q8BL06 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usp54Q8BL06 Gm16499-201ENSMUST00000204648 2065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms