Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm8325-201ENSMUST00000099086 453 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Pcdh8Q7TSK3 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm11578-201ENSMUST00000118530 459 ntBASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mir6941-201ENSMUST00000184711 59 ntBASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm42430-201ENSMUST00000197209 616 ntBASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm4903-201ENSMUST00000210462 405 ntBASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm45500-201ENSMUST00000211676 803 ntBASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Pcdh8Q7TSK3 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm11996-201ENSMUST00000117538 915 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm34379-201ENSMUST00000195036 290 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm5870-201ENSMUST00000196461 282 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm43778-201ENSMUST00000199438 199 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Pcdh8Q7TSK3 Gm18204-201ENSMUST00000209835 793 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms