Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3d21Q7TSG5 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sh3d21Q7TSG5 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sh3d21Q7TSG5 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm19015-201ENSMUST00000184002 1189 ntBASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm42588-201ENSMUST00000200538 1297 ntBASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 AC154589.2-201ENSMUST00000228847 251 ntBASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm44999-201ENSMUST00000207456 1493 ntBASIC12□□□□□ -0.49
Sh3d21Q7TSG5 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Gm6024-201ENSMUST00000117850 1558 ntBASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sh3d21Q7TSG5 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm26013-201ENSMUST00000104404 119 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm11451-201ENSMUST00000118946 630 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm22334-201ENSMUST00000158070 133 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm42657-201ENSMUST00000201746 211 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm43124-201ENSMUST00000201878 278 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sh3d21Q7TSG5 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sh3d21Q7TSG5 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms