Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Gm28581-201ENSMUST00000186086 2177 ntBASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Acadsb-202ENSMUST00000117518 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rad54bQ6PFE3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Rad54bQ6PFE3 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Gm37516-201ENSMUST00000192593 1954 ntBASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Rad54bQ6PFE3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm16518-201ENSMUST00000117960 508 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Mir1893-201ENSMUST00000122565 83 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm4726-201ENSMUST00000135604 736 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm6019-201ENSMUST00000148369 736 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm27953-201ENSMUST00000185171 143 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm3551-201ENSMUST00000190750 664 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 CT485606.1-201ENSMUST00000213187 878 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Rad54bQ6PFE3 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms