Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 AC122293.1-201ENSMUST00000218333 2231 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 1700006J14Rik-203ENSMUST00000160091 2629 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Krt78-201ENSMUST00000164932 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Gm10390-202ENSMUST00000181905 4269 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf220Q6PDX6 Tomm40l-203ENSMUST00000111327 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Wdr37-212ENSMUST00000176922 3780 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Arhgap45-201ENSMUST00000043311 3499 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Kcnj15-206ENSMUST00000113859 5046 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Fhod1-201ENSMUST00000014922 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm15276-201ENSMUST00000145953 498 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm5616-201ENSMUST00000165252 384 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm8741-201ENSMUST00000174736 384 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mir8109-201ENSMUST00000184375 117 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mir8093-201ENSMUST00000185043 137 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm38117-201ENSMUST00000194653 939 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm4157-201ENSMUST00000211647 679 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Lnpk-201ENSMUST00000064503 3195 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Zfp446-201ENSMUST00000045810 4615 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf220Q6PDX6 Fam53b-206ENSMUST00000106168 3630 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Slc22a21-201ENSMUST00000076493 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm11500-201ENSMUST00000118237 601 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm13665-201ENSMUST00000120830 528 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm8856-201ENSMUST00000185254 1144 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm38317-201ENSMUST00000195564 343 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Rps4l-202ENSMUST00000204242 789 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Gm17827-201ENSMUST00000211825 742 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Zfp672-201ENSMUST00000057836 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf220Q6PDX6 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms