Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm32111-201ENSMUST00000207689 846 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Id2-203ENSMUST00000222667 958 ntBASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smarcc2Q6PDG5 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm6677-201ENSMUST00000195100 441 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm40414-201ENSMUST00000197608 481 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm3726-201ENSMUST00000203110 785 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm3793-201ENSMUST00000204973 672 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm6024-201ENSMUST00000117850 1558 ntBASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smarcc2Q6PDG5 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Smarcc2Q6PDG5 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 AC108416.1-201ENSMUST00000228755 1558 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Smarcc2Q6PDG5 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms