Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm11451-201ENSMUST00000118946 630 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm12337-201ENSMUST00000119634 400 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm13117-201ENSMUST00000120894 691 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm15744-201ENSMUST00000161734 213 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm37852-201ENSMUST00000193027 350 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm33080-201ENSMUST00000205429 172 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Usp49Q6P9L4 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Mir1893-201ENSMUST00000122565 83 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Mir8091-201ENSMUST00000183602 139 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm38210-201ENSMUST00000191944 809 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Gm45594-201ENSMUST00000211717 241 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Usp49Q6P9L4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms