Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ift88Q61371 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ift88Q61371 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm21142-201ENSMUST00000179999 2604 ntBASIC12.01□□□□□ -0.49
Ift88Q61371 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Tor1aip2-201ENSMUST00000060404 5135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.01□□□□□ -0.49
Ift88Q61371 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.01□□□□□ -0.49
Ift88Q61371 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm37826-201ENSMUST00000195329 322 ntBASIC12.01□□□□□ -0.49
Ift88Q61371 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.01□□□□□ -0.49
Ift88Q61371 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ift88Q61371 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Ift88Q61371 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ift88Q61371 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Gm38376-201ENSMUST00000195493 2253 ntBASIC12□□□□□ -0.49
Ift88Q61371 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12□□□□□ -0.49
Ift88Q61371 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Gm12165-201ENSMUST00000117047 342 ntBASIC12□□□□□ -0.49
Ift88Q61371 Gm8737-201ENSMUST00000122208 642 ntBASIC12□□□□□ -0.49
Ift88Q61371 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC12□□□□□ -0.49
Ift88Q61371 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12□□□□□ -0.49
Ift88Q61371 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12□□□□□ -0.49
Ift88Q61371 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12□□□□□ -0.49
Ift88Q61371 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Gm21092-201ENSMUST00000178995 955 ntBASIC12□□□□□ -0.49
Ift88Q61371 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Gm19046-201ENSMUST00000221263 1298 ntBASIC12□□□□□ -0.49
Ift88Q61371 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Ift88Q61371 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ift88Q61371 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ift88Q61371 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ift88Q61371 Gm4900-201ENSMUST00000222046 1628 ntBASIC12□□□□□ -0.49
Ift88Q61371 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12□□□□□ -0.49
Ift88Q61371 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ift88Q61371 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 AC144938.1-201ENSMUST00000223994 2167 ntBASIC11.99□□□□□ -0.49
Ift88Q61371 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ift88Q61371 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ift88Q61371 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.99□□□□□ -0.49
Ift88Q61371 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.99□□□□□ -0.49
Ift88Q61371 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms