Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ddx49Q4FZF3 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm23439-201ENSMUST00000104292 132 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm23604-201ENSMUST00000104311 132 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Snord17-201ENSMUST00000104526 238 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm23582-201ENSMUST00000158530 139 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm7928-201ENSMUST00000181249 701 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm29808-201ENSMUST00000194419 468 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Lect2-202ENSMUST00000225183 823 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm5159-201ENSMUST00000212733 1652 ntBASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ddx49Q4FZF3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm43966-201ENSMUST00000203301 612 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.78□□□□□ -0.36
Ddx49Q4FZF3 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms