Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm16439-201ENSMUST00000100687 564 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm8864-201ENSMUST00000118653 1010 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm15664-201ENSMUST00000160167 184 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm29487-201ENSMUST00000190146 256 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm28893-201ENSMUST00000190951 1108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm18299-201ENSMUST00000192026 636 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm38220-201ENSMUST00000195774 1447 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 A1cf-204ENSMUST00000224564 1432 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.12□□□□□ -0.15
Sf3b2Q3UJB0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm14650-201ENSMUST00000120400 889 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm15727-201ENSMUST00000122416 437 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm23555-201ENSMUST00000157815 135 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm17147-201ENSMUST00000164176 432 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm5501-201ENSMUST00000165917 832 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm37819-201ENSMUST00000194626 1065 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm32102-201ENSMUST00000196885 241 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm25483-201ENSMUST00000083224 227 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sf3b2Q3UJB0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 AC116596.1-201ENSMUST00000228112 1762 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Fam220-ps-201ENSMUST00000116535 783 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm11191-201ENSMUST00000117231 610 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm11929-201ENSMUST00000118175 945 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm16480-201ENSMUST00000120439 832 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm15031-201ENSMUST00000121341 210 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm12950-201ENSMUST00000121683 417 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm26021-201ENSMUST00000158664 131 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm17107-201ENSMUST00000170983 553 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Zfp419-201ENSMUST00000173446 916 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm43103-201ENSMUST00000199021 802 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm7812-201ENSMUST00000203479 874 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm44658-201ENSMUST00000207965 637 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm8162-201ENSMUST00000213951 665 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 AC116589.8-201ENSMUST00000220945 364 ntTSL 2 BASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.1□□□□□ -0.15
Sf3b2Q3UJB0 Bcl2-202ENSMUST00000189999 2841 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms