Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm4917-201ENSMUST00000121452 650 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm25569-201ENSMUST00000157175 131 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm26119-201ENSMUST00000175601 104 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Lect2-202ENSMUST00000225183 823 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.11□□□□□ -0.63
Ebf1Q07802 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ebf1Q07802 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.1□□□□□ -0.63
Ebf1Q07802 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm13204-201ENSMUST00000120110 821 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm15136-201ENSMUST00000120552 533 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Mir432-201ENSMUST00000157230 75 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm25998-201ENSMUST00000175397 53 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm42751-201ENSMUST00000198065 559 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm2448-201ENSMUST00000207080 559 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Thoc7-209ENSMUST00000225325 765 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Gm26782-203ENSMUST00000227103 751 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ebf1Q07802 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.1□□□□□ -0.63
Ebf1Q07802 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ebf1Q07802 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms