Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm37723-201ENSMUST00000194480 565 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm3791-201ENSMUST00000220790 768 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 AC142266.1-201ENSMUST00000228107 415 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.81□□□□□ -0.52
Col9a2Q07643 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Col9a2Q07643 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 AC153524.2-202ENSMUST00000220401 1794 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm16288-201ENSMUST00000137940 367 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm25226-201ENSMUST00000158198 123 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm22876-201ENSMUST00000175450 298 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm25872-201ENSMUST00000177784 100 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm6606-201ENSMUST00000193613 947 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm43547-201ENSMUST00000197729 328 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm44640-201ENSMUST00000206894 247 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 AC154806.7-201ENSMUST00000227998 202 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm10238-201ENSMUST00000089689 408 ntBASIC11.8□□□□□ -0.52
Col9a2Q07643 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col9a2Q07643 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col9a2Q07643 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Col9a2Q07643 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col9a2Q07643 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms