Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm23153-201ENSMUST00000175323 313 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm42657-201ENSMUST00000201746 211 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC8.47□□□□□ -1.05
Cdx4Q07424 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 AC166344.1-201ENSMUST00000223745 674 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 CT025553.1-201ENSMUST00000226292 299 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm23105-201ENSMUST00000083719 134 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Olfr584-201ENSMUST00000098210 964 ntBASIC8.47□□□□□ -1.05
Cdx4Q07424 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.47□□□□□ -1.05
Cdx4Q07424 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
Cdx4Q07424 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Gm8752-201ENSMUST00000173427 1694 ntBASIC8.46□□□□□ -1.05
Cdx4Q07424 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
Cdx4Q07424 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Gm18642-201ENSMUST00000206642 1400 ntBASIC8.46□□□□□ -1.05
Cdx4Q07424 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Gm45416-201ENSMUST00000209713 2201 ntBASIC8.46□□□□□ -1.05
Cdx4Q07424 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.46□□□□□ -1.05
Cdx4Q07424 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Cdx4Q07424 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC8.46□□□□□ -1.05
Cdx4Q07424 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC8.46□□□□□ -1.05
Cdx4Q07424 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC8.46□□□□□ -1.05
Cdx4Q07424 1810041L15Rik-201ENSMUST00000080751 5917 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Cdx4Q07424 Dctn1-204ENSMUST00000113918 4321 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm44329-201ENSMUST00000197469 112 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm5298-201ENSMUST00000201122 892 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm7504-201ENSMUST00000201449 424 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm3028-201ENSMUST00000213805 1119 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC8.46□□□□□ -1.06
Cdx4Q07424 AC136376.2-201ENSMUST00000228819 490 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Cdx4Q07424 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC8.46□□□□□ -1.06
Cdx4Q07424 Gm28424-201ENSMUST00000187393 1319 ntBASIC8.46□□□□□ -1.06
Cdx4Q07424 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms