Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Npas1P97459 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.12□□□□□ -0.95
Npas1P97459 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm13296-201ENSMUST00000117854 997 ntBASIC9.12□□□□□ -0.95
Npas1P97459 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC9.12□□□□□ -0.95
Npas1P97459 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm8343-201ENSMUST00000182705 994 ntBASIC9.12□□□□□ -0.95
Npas1P97459 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.12□□□□□ -0.95
Npas1P97459 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC9.12□□□□□ -0.95
Npas1P97459 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.12□□□□□ -0.95
Npas1P97459 Gm6722-201ENSMUST00000221586 390 ntBASIC9.12□□□□□ -0.95
Npas1P97459 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.12□□□□□ -0.95
Npas1P97459 AC137950.2-201ENSMUST00000227127 1089 ntBASIC9.12□□□□□ -0.95
Npas1P97459 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.12□□□□□ -0.95
Npas1P97459 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC9.12□□□□□ -0.95
Npas1P97459 Gcm1-201ENSMUST00000024104 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Slitrk1-201ENSMUST00000100322 5359 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Npas1P97459 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Slc6a16-203ENSMUST00000213347 2865 ntAPPRIS P5 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm31108-201ENSMUST00000204101 1633 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Npas1P97459 Rpgrip1-213ENSMUST00000181401 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.12□□□□□ -0.95
Npas1P97459 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Npas1P97459 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Npas1P97459 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Sema4d-203ENSMUST00000110040 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Npas1P97459 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Rab36-207ENSMUST00000147802 3291 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Smarcc2-203ENSMUST00000105235 4032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Ccdc136-209ENSMUST00000181464 3444 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Rad51d-201ENSMUST00000018985 3426 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Padi1-201ENSMUST00000026378 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gm45170-201ENSMUST00000206746 1671 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gm15207-201ENSMUST00000119259 442 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Trav4d-2-201ENSMUST00000120914 335 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.11□□□□□ -0.95
Npas1P97459 Gm43179-201ENSMUST00000198797 275 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.11□□□□□ -0.95
Npas1P97459 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC9.11□□□□□ -0.95
Npas1P97459 Gm45865-201ENSMUST00000211815 945 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gm4978-201ENSMUST00000071565 801 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Grik1-211ENSMUST00000228188 3221 ntBASIC9.11□□□□□ -0.95
Npas1P97459 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Xpo7-201ENSMUST00000022696 4472 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Npas1P97459 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
Npas1P97459 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms