Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
H3f3aP84244 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.72□□□□□ -0.85
H3f3aP84244 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm12030-201ENSMUST00000121917 223 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 Mir1893-201ENSMUST00000122565 83 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm22379-201ENSMUST00000157480 131 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm9081-201ENSMUST00000182346 991 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm28746-201ENSMUST00000187453 380 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 CT030166.5-201ENSMUST00000222249 420 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
H3f3aP84244 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
H3f3aP84244 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
H3f3aP84244 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
H3f3aP84244 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.72□□□□□ -0.85
H3f3aP84244 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
H3f3aP84244 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
H3f3aP84244 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
H3f3aP84244 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.71□□□□□ -0.85
H3f3aP84244 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
H3f3aP84244 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
H3f3aP84244 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
H3f3aP84244 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC9.71□□□□□ -0.86
H3f3aP84244 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm6322-201ENSMUST00000118789 1004 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.71□□□□□ -0.86
H3f3aP84244 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm5778-201ENSMUST00000171003 1072 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC9.71□□□□□ -0.86
H3f3aP84244 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.71□□□□□ -0.86
H3f3aP84244 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Gm7880-201ENSMUST00000203748 871 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Gm33080-201ENSMUST00000205429 172 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm8162-201ENSMUST00000213951 665 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm9139-201ENSMUST00000218817 700 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Gm3619-201ENSMUST00000219947 775 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 AC154461.3-201ENSMUST00000224831 573 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Prrxl1-205ENSMUST00000228878 723 ntBASIC9.71□□□□□ -0.86
H3f3aP84244 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
H3f3aP84244 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms