Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
CiitaP79621 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CiitaP79621 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.82□□□□□ -0.52
CiitaP79621 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CiitaP79621 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CiitaP79621 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.81□□□□□ -0.52
CiitaP79621 Gm5764-201ENSMUST00000118817 885 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.81□□□□□ -0.52
CiitaP79621 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.81□□□□□ -0.52
CiitaP79621 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.81□□□□□ -0.52
CiitaP79621 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gm4862-201ENSMUST00000170405 438 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
CiitaP79621 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Gm24312-201ENSMUST00000178677 119 ntBASIC11.81□□□□□ -0.52
CiitaP79621 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.81□□□□□ -0.52
CiitaP79621 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CiitaP79621 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gm5865-201ENSMUST00000198713 637 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.81□□□□□ -0.52
CiitaP79621 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.81□□□□□ -0.52
CiitaP79621 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CiitaP79621 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
CiitaP79621 Gm3372-201ENSMUST00000198806 1792 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
CiitaP79621 Gm11475-201ENSMUST00000118482 476 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Gm11993-201ENSMUST00000121861 820 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Gm12453-201ENSMUST00000121981 331 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
CiitaP79621 Gm9162-201ENSMUST00000182081 991 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Mir6941-201ENSMUST00000184711 59 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.8□□□□□ -0.52
CiitaP79621 Gm28746-201ENSMUST00000187453 380 ntBASIC11.8□□□□□ -0.52
CiitaP79621 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms