Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Lmo4P61969 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.8□□□□□ -1
Lmo4P61969 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -1
Lmo4P61969 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC8.8□□□□□ -1
Lmo4P61969 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Gm8152-201ENSMUST00000120842 637 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm5395-201ENSMUST00000121650 915 ntBASIC8.8□□□□□ -1
Lmo4P61969 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Gm24346-201ENSMUST00000158712 194 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Cd9-ps-201ENSMUST00000174687 650 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm22876-201ENSMUST00000175450 298 ntBASIC8.8□□□□□ -1
Lmo4P61969 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm29543-201ENSMUST00000188138 967 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm7539-201ENSMUST00000189789 630 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm7445-201ENSMUST00000192115 340 ntBASIC8.8□□□□□ -1
Lmo4P61969 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC8.8□□□□□ -1
Lmo4P61969 Gm18555-201ENSMUST00000197935 584 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm42803-201ENSMUST00000201051 451 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm18466-201ENSMUST00000209147 499 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC8.8□□□□□ -1
Lmo4P61969 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 AC152169.1-201ENSMUST00000223901 701 ntBASIC8.8□□□□□ -1
Lmo4P61969 AC154806.7-201ENSMUST00000227998 202 ntBASIC8.8□□□□□ -1
Lmo4P61969 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Atf7-201ENSMUST00000096143 390 ntBASIC8.8□□□□□ -1
Lmo4P61969 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC8.8□□□□□ -1
Lmo4P61969 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Gm5472-201ENSMUST00000178604 1678 ntBASIC8.8□□□□□ -1
Lmo4P61969 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Gm6768-201ENSMUST00000022467 1878 ntBASIC8.8□□□□□ -1
Lmo4P61969 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Pdcl-202ENSMUST00000112940 3056 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Mypopos-202ENSMUST00000205975 2321 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Gm13104-201ENSMUST00000119651 1446 ntBASIC8.8□□□□□ -1
Lmo4P61969 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC8.8□□□□□ -1
Lmo4P61969 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC8.8□□□□□ -1
Lmo4P61969 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Lmo4P61969 Gm22495-201ENSMUST00000104492 126 ntBASIC8.79□□□□□ -1
Lmo4P61969 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC8.79□□□□□ -1
Lmo4P61969 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Lmo4P61969 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC8.79□□□□□ -1
Lmo4P61969 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Lmo4P61969 Gm13688-201ENSMUST00000121557 608 ntBASIC8.79□□□□□ -1
Lmo4P61969 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.79□□□□□ -1
Lmo4P61969 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC8.79□□□□□ -1
Lmo4P61969 Gm6612-201ENSMUST00000170777 395 ntBASIC8.79□□□□□ -1
Lmo4P61969 Gm6291-201ENSMUST00000179994 309 ntBASIC8.79□□□□□ -1
Lmo4P61969 Gm11942-201ENSMUST00000180255 345 ntBASIC8.79□□□□□ -1
Lmo4P61969 Gm7069-201ENSMUST00000182418 1008 ntBASIC8.79□□□□□ -1
Lmo4P61969 Gm5274-201ENSMUST00000182641 1003 ntBASIC8.79□□□□□ -1
Lmo4P61969 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC8.79□□□□□ -1
Lmo4P61969 Gm38349-201ENSMUST00000195732 462 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms