Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rrp1P56183 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rrp1P56183 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rrp1P56183 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm22144-201ENSMUST00000157402 102 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Gm23699-201ENSMUST00000158835 135 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Snord55-201ENSMUST00000174939 79 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Gm4812-201ENSMUST00000182847 993 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Gm4654-201ENSMUST00000183305 982 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm37905-201ENSMUST00000195310 341 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Gm3786-201ENSMUST00000202659 378 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm45398-201ENSMUST00000210561 165 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rrp1P56183 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm38344-201ENSMUST00000195306 1353 ntBASIC12.25□□□□□ -0.45
Rrp1P56183 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rrp1P56183 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rrp1P56183 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rrp1P56183 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Gm15432-201ENSMUST00000121106 195 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm22902-201ENSMUST00000158488 302 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Rrp1P56183 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.24□□□□□ -0.45
Rrp1P56183 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm5599-201ENSMUST00000209602 788 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm6781-201ENSMUST00000038304 1242 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rrp1P56183 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.24□□□□□ -0.45
Rrp1P56183 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Rrp1P56183 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC12.24□□□□□ -0.45
Rrp1P56183 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rrp1P56183 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.23□□□□□ -0.45
Rrp1P56183 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rrp1P56183 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms