Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm15136-201ENSMUST00000120552 533 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm25569-201ENSMUST00000157175 131 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm42751-201ENSMUST00000198065 559 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm43249-201ENSMUST00000200464 458 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm7939-201ENSMUST00000201233 1050 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 BC080696-201ENSMUST00000202858 1218 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm45094-201ENSMUST00000207013 617 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm40879-201ENSMUST00000220759 612 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 AC137871.1-201ENSMUST00000228278 475 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.35□□□□□ -0.75
Nkx2-6P43688 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-6P43688 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm9625-201ENSMUST00000180422 955 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm45135-201ENSMUST00000206787 1184 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 AC154435.1-201ENSMUST00000223938 959 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.34□□□□□ -0.75
Nkx2-6P43688 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.34□□□□□ -0.75
Nkx2-6P43688 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Nkx2-6P43688 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms