Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC10.84□□□□□ -0.67
Sox18P43680 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 AC153936.1-201ENSMUST00000219874 395 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox18P43680 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox18P43680 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sox18P43680 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.84□□□□□ -0.67
Sox18P43680 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sox18P43680 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC10.84□□□□□ -0.67
Sox18P43680 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sox18P43680 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Sox18P43680 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sox18P43680 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 AC130831.1-201ENSMUST00000224546 1474 ntBASIC10.83□□□□□ -0.68
Sox18P43680 AC131068.3-201ENSMUST00000228438 1456 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Gm15815-201ENSMUST00000120569 255 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.83□□□□□ -0.68
Sox18P43680 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox18P43680 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm37284-201ENSMUST00000193607 539 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Gm5982-201ENSMUST00000196234 512 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 AC164597.1-201ENSMUST00000226538 514 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm5471-201ENSMUST00000072732 337 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm44742-201ENSMUST00000207190 1412 ntBASIC10.83□□□□□ -0.68
Sox18P43680 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox18P43680 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox18P43680 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.83□□□□□ -0.68
Sox18P43680 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox18P43680 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms