Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm45598-202ENSMUST00000210719 986 ntBASIC9.95□□□□□ -0.82
Nedd8P29595 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Nedd8P29595 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Prim1-201ENSMUST00000026461 1583 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Nedd8P29595 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gpa33-204ENSMUST00000166860 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Gm37583-201ENSMUST00000195460 2487 ntBASIC9.95□□□□□ -0.82
Nedd8P29595 Pus7l-201ENSMUST00000049151 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Fignl1-207ENSMUST00000171938 2974 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Plekhb2-201ENSMUST00000027297 3279 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Cldn12-207ENSMUST00000179804 3752 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Nedd8P29595 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Nedd8P29595 Dhx30-219ENSMUST00000199529 4373 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Slco5a1-206ENSMUST00000147606 3615 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Hapln3-203ENSMUST00000206092 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Mcm5-205ENSMUST00000212811 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Pabpc5-201ENSMUST00000040961 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 AC126459.1-201ENSMUST00000214791 2123 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Eci2-201ENSMUST00000021854 1746 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 AC154220.1-201ENSMUST00000225033 1705 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Mblac2-201ENSMUST00000057598 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 Mospd4-201ENSMUST00000180618 576 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Nedd8P29595 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC9.94□□□□□ -0.82
Nedd8P29595 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC9.94□□□□□ -0.82
Nedd8P29595 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC9.94□□□□□ -0.82
Nedd8P29595 Gzmn-202ENSMUST00000225535 989 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Upb1-201ENSMUST00000039925 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Ndrg4-202ENSMUST00000073139 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Nedd8P29595 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.94□□□□□ -0.82
Nedd8P29595 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Usp4-209ENSMUST00000194959 3436 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Zbtb3-201ENSMUST00000172175 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Nedd8P29595 Cbr4-201ENSMUST00000034058 4309 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 1810034E14Rik-201ENSMUST00000181403 1805 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Nedd8P29595 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Galnt1-201ENSMUST00000000430 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nedd8P29595 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Nedd8P29595 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Gm28581-201ENSMUST00000186086 2177 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.93□□□□□ -0.82
Nedd8P29595 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Nedd8P29595 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.93□□□□□ -0.82
Nedd8P29595 Gm27953-201ENSMUST00000185171 143 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gm38158-201ENSMUST00000194617 339 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gm37032-201ENSMUST00000194882 2975 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gm38151-201ENSMUST00000195085 289 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gm43058-201ENSMUST00000197645 625 ntBASIC9.93□□□□□ -0.82
Nedd8P29595 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.93□□□□□ -0.82
Nedd8P29595 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.93□□□□□ -0.82
Nedd8P29595 Enthd1-201ENSMUST00000096347 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms