Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.85□□□□□ -0.99
Cdx1P18111 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm10702-201ENSMUST00000098929 1268 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC8.85□□□□□ -0.99
Cdx1P18111 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Tec-203ENSMUST00000113594 2580 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Nuggc-201ENSMUST00000079469 2567 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 AC122367.1-201ENSMUST00000221978 1709 ntBASIC8.85□□□□□ -0.99
Cdx1P18111 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Cdx1P18111 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Cdx1P18111 1700055D18Rik-202ENSMUST00000186030 3720 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Zfp418-201ENSMUST00000051435 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 R3hdm2-205ENSMUST00000105251 3739 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Cdx1P18111 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Dync1i2-205ENSMUST00000112139 2483 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm11700-201ENSMUST00000119409 403 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm6039-201ENSMUST00000121667 1250 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Ido2-201ENSMUST00000121992 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm23699-201ENSMUST00000158835 135 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cdx1P18111 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx1P18111 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm43962-201ENSMUST00000203898 190 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC8.84□□□□□ -0.99
Cdx1P18111 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 AC159308.2-201ENSMUST00000213592 2325 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 AC141438.2-201ENSMUST00000215068 271 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm270-201ENSMUST00000223010 976 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 AC135114.1-201ENSMUST00000228682 270 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Fes-201ENSMUST00000080932 2762 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm21811-201ENSMUST00000096485 930 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 4833420G17Rik-201ENSMUST00000026519 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Vmn2r-ps97-201ENSMUST00000222427 1970 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm4784-201ENSMUST00000117365 1824 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Anks1b-210ENSMUST00000182113 3553 ntTSL 5 BASIC8.84□□□□□ -0.99
Cdx1P18111 Slc13a4-201ENSMUST00000031868 3427 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Gm6580-201ENSMUST00000117504 1357 ntBASIC8.84□□□□□ -0.99
Cdx1P18111 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cdx1P18111 2310002L09Rik-202ENSMUST00000095023 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Cdx1P18111 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
Cdx1P18111 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cdx1P18111 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cdx1P18111 Carmil2-203ENSMUST00000213019 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Vil1-201ENSMUST00000027366 3124 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cdx1P18111 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cdx1P18111 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cdx1P18111 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms