Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Gm21142-201ENSMUST00000179999 2604 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Fv4P11370 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Gm15881-201ENSMUST00000148792 942 ntBASIC10.51□□□□□ -0.73
Fv4P11370 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Fv4P11370 Mir5120-201ENSMUST00000175020 78 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Gm10731-201ENSMUST00000181171 448 ntBASIC10.51□□□□□ -0.73
Fv4P11370 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Fv4P11370 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.51□□□□□ -0.73
Fv4P11370 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.51□□□□□ -0.73
Fv4P11370 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.51□□□□□ -0.73
Fv4P11370 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.51□□□□□ -0.73
Fv4P11370 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.51□□□□□ -0.73
Fv4P11370 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.51□□□□□ -0.73
Fv4P11370 CT025679.1-201ENSMUST00000227106 449 ntBASIC10.51□□□□□ -0.73
Fv4P11370 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Fv4P11370 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Fv4P11370 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Gm12337-201ENSMUST00000119634 400 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.5□□□□□ -0.73
Fv4P11370 Gm25343-201ENSMUST00000157460 107 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Gm4812-201ENSMUST00000182847 993 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.5□□□□□ -0.73
Fv4P11370 Gm9645-201ENSMUST00000197131 792 ntBASIC10.5□□□□□ -0.73
Fv4P11370 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Gm44980-201ENSMUST00000205826 314 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.5□□□□□ -0.73
Fv4P11370 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Id2-203ENSMUST00000222667 958 ntBASIC10.5□□□□□ -0.73
Fv4P11370 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.5□□□□□ -0.73
Fv4P11370 AC154257.1-202ENSMUST00000224729 843 ntBASIC10.5□□□□□ -0.73
Fv4P11370 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.5□□□□□ -0.73
Fv4P11370 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.5□□□□□ -0.73
Fv4P11370 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.5□□□□□ -0.73
Fv4P11370 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Fv4P11370 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Gm45124-201ENSMUST00000206723 2755 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Fv4P11370 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC10.5□□□□□ -0.73
Fv4P11370 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Fv4P11370 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Fv4P11370 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Gm38344-201ENSMUST00000195306 1353 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Fv4P11370 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.5□□□□□ -0.73
Fv4P11370 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Fv4P11370 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Fv4P11370 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Fv4P11370 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Fv4P11370 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms