Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Rc3h2P0C090 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.18□□□□□ -0.62
Rc3h2P0C090 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm6758-201ENSMUST00000119643 1055 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm11354-201ENSMUST00000121974 422 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Mir1893-201ENSMUST00000122565 83 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm6855-201ENSMUST00000206307 790 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.17□□□□□ -0.62
Rc3h2P0C090 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Rc3h2P0C090 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm11475-201ENSMUST00000118482 476 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm23647-201ENSMUST00000175042 109 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Rn5s-201ENSMUST00000177555 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm22109-201ENSMUST00000177995 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm22291-201ENSMUST00000178027 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm23284-201ENSMUST00000178069 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm25018-201ENSMUST00000179081 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 Gm25212-201ENSMUST00000179432 119 ntBASIC11.16□□□□□ -0.62
Rc3h2P0C090 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms