Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
NpcdF8VQB8 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm8725-201ENSMUST00000221829 1333 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm23129-201ENSMUST00000104259 132 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm14639-201ENSMUST00000120850 866 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm37009-201ENSMUST00000193297 361 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm38038-201ENSMUST00000193803 259 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gm7242-201ENSMUST00000221134 705 ntBASIC13.21□□□□□ -0.29
NpcdF8VQB8 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.21□□□□□ -0.29
NpcdF8VQB8 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NpcdF8VQB8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.21□□□□□ -0.3
NpcdF8VQB8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NpcdF8VQB8 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 AC211878.3-201ENSMUST00000222629 2018 ntBASIC13.2□□□□□ -0.3
NpcdF8VQB8 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.2□□□□□ -0.3
NpcdF8VQB8 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Gm15617-201ENSMUST00000118973 771 ntBASIC13.2□□□□□ -0.3
NpcdF8VQB8 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Gm25591-201ENSMUST00000177317 94 ntBASIC13.2□□□□□ -0.3
NpcdF8VQB8 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
NpcdF8VQB8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm16210-201ENSMUST00000122161 610 ntBASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC13.19□□□□□ -0.3
NpcdF8VQB8 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms