Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm14538-201ENSMUST00000122019 1327 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm4880-201ENSMUST00000207645 1696 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Cfap74-204ENSMUST00000123952 2365 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm25723-201ENSMUST00000104530 126 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Dtymk-203ENSMUST00000112893 1040 ntTSL 2 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Fhl1-206ENSMUST00000116596 1203 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 1700001J04Rik-202ENSMUST00000154037 743 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm23916-201ENSMUST00000158484 399 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm26021-201ENSMUST00000158664 131 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm23479-201ENSMUST00000158876 122 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm37301-201ENSMUST00000195412 568 ntBASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gm32772-203ENSMUST00000207022 675 ntTSL 3 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Sun5-201ENSMUST00000028982 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col4a6B1AVK5 AC154220.1-201ENSMUST00000225033 1705 ntBASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm2238-201ENSMUST00000192074 3669 ntBASIC11□□□□□ -0.65
Col4a6B1AVK5 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Uros-204ENSMUST00000106146 1483 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Glmp-207ENSMUST00000176425 960 ntTSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm26978-201ENSMUST00000182843 304 ntTSL 3 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Zfp572-201ENSMUST00000183674 1098 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm8960-201ENSMUST00000219787 788 ntBASIC11□□□□□ -0.65
Col4a6B1AVK5 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Col4a6B1AVK5 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Col4a6B1AVK5 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm9095-201ENSMUST00000117607 881 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm12011-201ENSMUST00000119734 618 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm9097-201ENSMUST00000120514 880 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm27441-201ENSMUST00000185000 105 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Mir8104-201ENSMUST00000185165 101 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm37016-201ENSMUST00000195507 660 ntTSL 5 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 AC164614.1-201ENSMUST00000216038 397 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm18596-201ENSMUST00000218133 843 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 AC154431.1-201ENSMUST00000224910 880 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Olfr1349-201ENSMUST00000051982 1054 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm5507-201ENSMUST00000091897 1008 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 AC154186.1-201ENSMUST00000227711 1597 ntBASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col4a6B1AVK5 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms