Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm37905-201ENSMUST00000195310 341 ntBASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sec61a2Q9JLR1 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Acacb-202ENSMUST00000102582 8788 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm23272-201ENSMUST00000104053 129 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm8302-201ENSMUST00000119217 852 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm15374-201ENSMUST00000119313 844 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm14460-201ENSMUST00000121511 639 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm25492-201ENSMUST00000157383 129 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm5542-201ENSMUST00000195485 1089 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm44329-201ENSMUST00000197469 112 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm29787-201ENSMUST00000222129 849 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm6430-201ENSMUST00000054664 1248 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm10020-201ENSMUST00000081993 612 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Sec61a2Q9JLR1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms