Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm43321-201ENSMUST00000198897 2409 ntBASIC14.32□□□□□ -0.12
U2af1Q9D883 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
U2af1Q9D883 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
U2af1Q9D883 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm13600-201ENSMUST00000117949 744 ntBASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm12783-201ENSMUST00000121425 397 ntBASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.31□□□□□ -0.12
U2af1Q9D883 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 AC134601.2-201ENSMUST00000221071 130 ntBASIC14.31□□□□□ -0.12
U2af1Q9D883 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
U2af1Q9D883 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
U2af1Q9D883 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
U2af1Q9D883 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm14993-201ENSMUST00000121180 164 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm11980-201ENSMUST00000121445 986 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm28746-201ENSMUST00000187453 380 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC14.3□□□□□ -0.12
U2af1Q9D883 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Gm25201-201ENSMUST00000083093 170 ntBASIC14.3□□□□□ -0.12
U2af1Q9D883 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
U2af1Q9D883 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
U2af1Q9D883 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
U2af1Q9D883 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC14.29□□□□□ -0.12
U2af1Q9D883 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm45675-201ENSMUST00000211202 3429 ntBASIC14.29□□□□□ -0.12
U2af1Q9D883 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
U2af1Q9D883 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
U2af1Q9D883 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm11801-201ENSMUST00000117807 746 ntBASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm13549-201ENSMUST00000118339 796 ntBASIC14.29□□□□□ -0.12
U2af1Q9D883 Gm11340-201ENSMUST00000119226 412 ntBASIC14.29□□□□□ -0.12
U2af1Q9D883 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms